Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 ADH5P3-201ENST00000433842 1137 ntBASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 YBX1P5-201ENST00000509441 847 ntBASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 AC005829.1-201ENST00000570002 483 ntBASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 MIR4469-201ENST00000583919 79 ntBASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 KRT8P39-201ENST00000396270 1433 ntBASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KHDC1Q4VXA5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 AC092474.2-201ENST00000424288 719 ntBASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 AC109635.5-201ENST00000533593 962 ntBASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 AL139011.1-202ENST00000642063 584 ntBASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 AC013268.4-201ENST00000637413 2228 ntBASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KHDC1Q4VXA5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 AC002056.1-201ENST00000395613 760 ntBASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 MIR1233-2-201ENST00000408138 82 ntBASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 MIR1233-1-201ENST00000408722 82 ntBASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 MKNK2P1-201ENST00000437526 628 ntBASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 AC112191.1-201ENST00000523689 701 ntBASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 MIR3687-2-201ENST00000577708 61 ntBASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.48■□□□□ 0.23
KHDC1Q4VXA5 MIR3687-1-201ENST00000614492 61 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms