Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 SLC25A1P3-201ENST00000395415 828 ntBASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 SNX29P1-201ENST00000548357 1007 ntBASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CTC1Q2NKJ3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 AC133552.6-201ENST00000613406 534 ntBASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 AC006449.5-201ENST00000610658 2098 ntBASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 AL133338.1-201ENST00000565695 1517 ntBASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTC1Q2NKJ3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTC1Q2NKJ3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms