Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 SPDYE21P-201ENST00000413323 827 ntBASIC14.12□□□□□ -0.15
UBA52P62987 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.12□□□□□ -0.15
UBA52P62987 AP006288.1-201ENST00000446065 395 ntBASIC14.12□□□□□ -0.15
UBA52P62987 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.12□□□□□ -0.15
UBA52P62987 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.12□□□□□ -0.15
UBA52P62987 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 SIGLEC16-201ENST00000599858 1437 ntBASIC14.12□□□□□ -0.15
UBA52P62987 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.12□□□□□ -0.15
UBA52P62987 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.12□□□□□ -0.15
UBA52P62987 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UBA52P62987 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBA52P62987 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.11□□□□□ -0.15
UBA52P62987 AC004817.3-201ENST00000602957 2129 ntBASIC14.11□□□□□ -0.15
UBA52P62987 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.11□□□□□ -0.15
UBA52P62987 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UBA52P62987 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
UBA52P62987 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
UBA52P62987 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UBA52P62987 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.11□□□□□ -0.15
UBA52P62987 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.11□□□□□ -0.15
UBA52P62987 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.11□□□□□ -0.15
UBA52P62987 CICP13-201ENST00000422015 2789 ntBASIC14.11□□□□□ -0.15
UBA52P62987 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.11□□□□□ -0.15
UBA52P62987 AC103564.2-201ENST00000432853 1299 ntBASIC14.11□□□□□ -0.15
UBA52P62987 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.11□□□□□ -0.15
UBA52P62987 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.11□□□□□ -0.15
UBA52P62987 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
UBA52P62987 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.11□□□□□ -0.15
UBA52P62987 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.11□□□□□ -0.15
UBA52P62987 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.11□□□□□ -0.15
UBA52P62987 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.11□□□□□ -0.15
UBA52P62987 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.11□□□□□ -0.15
UBA52P62987 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBA52P62987 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.11□□□□□ -0.15
UBA52P62987 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.1□□□□□ -0.15
UBA52P62987 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.1□□□□□ -0.15
UBA52P62987 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.1□□□□□ -0.15
UBA52P62987 AC010460.3-201ENST00000511359 1579 ntBASIC14.1□□□□□ -0.15
UBA52P62987 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBA52P62987 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.1□□□□□ -0.15
UBA52P62987 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.1□□□□□ -0.15
UBA52P62987 MCCD1P2-201ENST00000423228 335 ntBASIC14.1□□□□□ -0.15
UBA52P62987 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.1□□□□□ -0.15
UBA52P62987 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.1□□□□□ -0.15
UBA52P62987 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBA52P62987 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
UBA52P62987 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.1□□□□□ -0.15
UBA52P62987 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
UBA52P62987 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBA52P62987 AC005829.1-201ENST00000570002 483 ntBASIC14.1□□□□□ -0.15
UBA52P62987 AL596442.2-201ENST00000610240 980 ntBASIC14.1□□□□□ -0.15
UBA52P62987 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.1□□□□□ -0.15
UBA52P62987 AL589182.2-201ENST00000619332 1049 ntBASIC14.1□□□□□ -0.15
UBA52P62987 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.1□□□□□ -0.15
UBA52P62987 AC073592.5-201ENST00000624854 528 ntBASIC14.1□□□□□ -0.15
UBA52P62987 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.1□□□□□ -0.15
UBA52P62987 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms