Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.32■□□□□ 0.04
RPS3AP61247 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.32■□□□□ 0.04
RPS3AP61247 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.32■□□□□ 0.04
RPS3AP61247 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RPS3AP61247 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
RPS3AP61247 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.32■□□□□ 0.04
RPS3AP61247 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.32■□□□□ 0.04
RPS3AP61247 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
RPS3AP61247 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.32■□□□□ 0.04
RPS3AP61247 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.32■□□□□ 0.04
RPS3AP61247 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.32■□□□□ 0.04
RPS3AP61247 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.32■□□□□ 0.04
RPS3AP61247 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RPS3AP61247 AC129492.6-201ENST00000611383 1305 ntBASIC15.32■□□□□ 0.04
RPS3AP61247 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.32■□□□□ 0.04
RPS3AP61247 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.32■□□□□ 0.04
RPS3AP61247 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
RPS3AP61247 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.32■□□□□ 0.04
RPS3AP61247 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.32■□□□□ 0.04
RPS3AP61247 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RPS3AP61247 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.32■□□□□ 0.04
RPS3AP61247 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.31■□□□□ 0.04
RPS3AP61247 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RPS3AP61247 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RPS3AP61247 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 AL391256.1-201ENST00000443260 1855 ntBASIC15.31■□□□□ 0.04
RPS3AP61247 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.31■□□□□ 0.04
RPS3AP61247 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RPS3AP61247 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 AL137784.3-201ENST00000623858 2288 ntBASIC15.31■□□□□ 0.04
RPS3AP61247 AL359258.3-201ENST00000622910 2331 ntBASIC15.31■□□□□ 0.04
RPS3AP61247 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RPS3AP61247 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RPS3AP61247 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.31■□□□□ 0.04
RPS3AP61247 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.31■□□□□ 0.04
RPS3AP61247 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.31■□□□□ 0.04
RPS3AP61247 AC087163.2-201ENST00000457299 853 ntBASIC15.31■□□□□ 0.04
RPS3AP61247 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.31■□□□□ 0.04
RPS3AP61247 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.31■□□□□ 0.04
RPS3AP61247 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.31■□□□□ 0.04
RPS3AP61247 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.31■□□□□ 0.04
RPS3AP61247 AL671883.3-201ENST00000603274 991 ntBASIC15.31■□□□□ 0.04
RPS3AP61247 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.31■□□□□ 0.04
RPS3AP61247 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.31■□□□□ 0.04
RPS3AP61247 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RPS3AP61247 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS3AP61247 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS3AP61247 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS3AP61247 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS3AP61247 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
RPS3AP61247 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.3■□□□□ 0.04
RPS3AP61247 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS3AP61247 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS3AP61247 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS3AP61247 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS3AP61247 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms