Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
AP3S2P59780 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
AP3S2P59780 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
AP3S2P59780 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.01□□□□□ -0.17
AP3S2P59780 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AP3S2P59780 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.01□□□□□ -0.17
AP3S2P59780 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.01□□□□□ -0.17
AP3S2P59780 AP003680.1-201ENST00000598970 3660 ntBASIC14.01□□□□□ -0.17
AP3S2P59780 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.01□□□□□ -0.17
AP3S2P59780 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.01□□□□□ -0.17
AP3S2P59780 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
AP3S2P59780 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
AP3S2P59780 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.01□□□□□ -0.17
AP3S2P59780 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.01□□□□□ -0.17
AP3S2P59780 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.01□□□□□ -0.17
AP3S2P59780 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.01□□□□□ -0.17
AP3S2P59780 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 FAM201B-201ENST00000458407 597 ntBASIC14.01□□□□□ -0.17
AP3S2P59780 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.01□□□□□ -0.17
AP3S2P59780 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
AP3S2P59780 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.01□□□□□ -0.17
AP3S2P59780 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.01□□□□□ -0.17
AP3S2P59780 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.01□□□□□ -0.17
AP3S2P59780 AC011840.4-201ENST00000578471 627 ntBASIC14.01□□□□□ -0.17
AP3S2P59780 MPDU1-223ENST00000582151 728 ntBASIC14.01□□□□□ -0.17
AP3S2P59780 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.01□□□□□ -0.17
AP3S2P59780 AC005336.2-201ENST00000593183 939 ntBASIC14.01□□□□□ -0.17
AP3S2P59780 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.01□□□□□ -0.17
AP3S2P59780 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.01□□□□□ -0.17
AP3S2P59780 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.01□□□□□ -0.17
AP3S2P59780 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
AP3S2P59780 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
AP3S2P59780 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 AL592424.1-201ENST00000563624 1536 ntBASIC14□□□□□ -0.17
AP3S2P59780 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AP3S2P59780 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 API5-202ENST00000420461 2009 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14□□□□□ -0.17
AP3S2P59780 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP3S2P59780 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14□□□□□ -0.17
AP3S2P59780 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
AP3S2P59780 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 AC092597.1-201ENST00000487352 616 ntBASIC14□□□□□ -0.17
AP3S2P59780 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14□□□□□ -0.17
AP3S2P59780 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14□□□□□ -0.17
AP3S2P59780 CD99P1-205ENST00000527459 561 ntBASIC14□□□□□ -0.17
AP3S2P59780 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14□□□□□ -0.17
AP3S2P59780 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14□□□□□ -0.17
AP3S2P59780 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP3S2P59780 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
AP3S2P59780 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 R3HDM2P2-201ENST00000401880 2116 ntBASIC14□□□□□ -0.17
AP3S2P59780 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14□□□□□ -0.17
AP3S2P59780 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP3S2P59780 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms