Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AC026691.1-201ENST00000602502 2017 ntBASIC15.18■□□□□ 0.02
PSMD4P55036 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 TFAMP1-201ENST00000412727 736 ntBASIC15.18■□□□□ 0.02
PSMD4P55036 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.18■□□□□ 0.02
PSMD4P55036 BX842568.4-201ENST00000421222 227 ntBASIC15.18■□□□□ 0.02
PSMD4P55036 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PSMD4P55036 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.18■□□□□ 0.02
PSMD4P55036 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.18■□□□□ 0.02
PSMD4P55036 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.18■□□□□ 0.02
PSMD4P55036 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.18■□□□□ 0.02
PSMD4P55036 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.18■□□□□ 0.02
PSMD4P55036 AC005829.1-201ENST00000570002 483 ntBASIC15.18■□□□□ 0.02
PSMD4P55036 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PSMD4P55036 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PSMD4P55036 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PSMD4P55036 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.18■□□□□ 0.02
PSMD4P55036 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.18■□□□□ 0.02
PSMD4P55036 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.18■□□□□ 0.02
PSMD4P55036 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PSMD4P55036 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PSMD4P55036 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.18■□□□□ 0.02
PSMD4P55036 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.18■□□□□ 0.02
PSMD4P55036 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.18■□□□□ 0.02
PSMD4P55036 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PSMD4P55036 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PSMD4P55036 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PSMD4P55036 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.18■□□□□ 0.02
PSMD4P55036 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.17■□□□□ 0.02
PSMD4P55036 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PSMD4P55036 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.17■□□□□ 0.02
PSMD4P55036 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.17■□□□□ 0.02
PSMD4P55036 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.17■□□□□ 0.02
PSMD4P55036 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
PSMD4P55036 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PSMD4P55036 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
PSMD4P55036 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PSMD4P55036 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.17■□□□□ 0.02
PSMD4P55036 HTR5BP-201ENST00000430851 1154 ntBASIC15.17■□□□□ 0.02
PSMD4P55036 SPDYE11-202ENST00000450699 704 ntBASIC15.17■□□□□ 0.02
PSMD4P55036 PRYP6-201ENST00000514804 343 ntBASIC15.17■□□□□ 0.02
PSMD4P55036 AL135744.1-201ENST00000565098 629 ntBASIC15.17■□□□□ 0.02
PSMD4P55036 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.17■□□□□ 0.02
PSMD4P55036 SPDYE9P-201ENST00000570642 692 ntBASIC15.17■□□□□ 0.02
PSMD4P55036 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
PSMD4P55036 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 SPDYE10P-202ENST00000612005 668 ntBASIC15.17■□□□□ 0.02
PSMD4P55036 SPDYE8P-202ENST00000612377 668 ntBASIC15.17■□□□□ 0.02
PSMD4P55036 AC092902.6-201ENST00000641783 218 ntBASIC15.17■□□□□ 0.02
PSMD4P55036 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PSMD4P55036 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PSMD4P55036 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.17■□□□□ 0.02
PSMD4P55036 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.17■□□□□ 0.02
PSMD4P55036 AC092364.2-201ENST00000596710 2692 ntBASIC15.17■□□□□ 0.02
PSMD4P55036 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.17■□□□□ 0.02
PSMD4P55036 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PSMD4P55036 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PSMD4P55036 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.17■□□□□ 0.02
PSMD4P55036 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PSMD4P55036 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.17■□□□□ 0.02
PSMD4P55036 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.16■□□□□ 0.02
PSMD4P55036 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PSMD4P55036 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.16■□□□□ 0.02
PSMD4P55036 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PSMD4P55036 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.16■□□□□ 0.02
PSMD4P55036 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms