Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ATP1B3P54709 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ATP1B3P54709 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATP1B3P54709 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.17□□□□□ -0.14
ATP1B3P54709 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ATP1B3P54709 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.17□□□□□ -0.14
ATP1B3P54709 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.17□□□□□ -0.14
ATP1B3P54709 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.17□□□□□ -0.14
ATP1B3P54709 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.17□□□□□ -0.14
ATP1B3P54709 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.17□□□□□ -0.14
ATP1B3P54709 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ATP1B3P54709 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.17□□□□□ -0.14
ATP1B3P54709 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.17□□□□□ -0.14
ATP1B3P54709 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 HNRNPDP1-201ENST00000439535 754 ntBASIC14.17□□□□□ -0.14
ATP1B3P54709 AC108073.2-201ENST00000464002 357 ntBASIC14.17□□□□□ -0.14
ATP1B3P54709 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.17□□□□□ -0.14
ATP1B3P54709 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.17□□□□□ -0.14
ATP1B3P54709 MIR4515-201ENST00000584082 81 ntBASIC14.17□□□□□ -0.14
ATP1B3P54709 AC010654.1-201ENST00000615722 808 ntBASIC14.17□□□□□ -0.14
ATP1B3P54709 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.17□□□□□ -0.14
ATP1B3P54709 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
ATP1B3P54709 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.17□□□□□ -0.14
ATP1B3P54709 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.17□□□□□ -0.14
ATP1B3P54709 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ATP1B3P54709 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.17□□□□□ -0.14
ATP1B3P54709 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.17□□□□□ -0.14
ATP1B3P54709 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.17□□□□□ -0.14
ATP1B3P54709 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.17□□□□□ -0.14
ATP1B3P54709 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATP1B3P54709 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ATP1B3P54709 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ATP1B3P54709 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.16□□□□□ -0.14
ATP1B3P54709 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.16□□□□□ -0.14
ATP1B3P54709 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ATP1B3P54709 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.16□□□□□ -0.14
ATP1B3P54709 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ATP1B3P54709 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ATP1B3P54709 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.16□□□□□ -0.14
ATP1B3P54709 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.16□□□□□ -0.14
ATP1B3P54709 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.16□□□□□ -0.14
ATP1B3P54709 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.16□□□□□ -0.14
ATP1B3P54709 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.16□□□□□ -0.14
ATP1B3P54709 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ATP1B3P54709 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.16□□□□□ -0.14
ATP1B3P54709 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATP1B3P54709 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
ATP1B3P54709 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms