Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CLTCL1P53675 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
CLTCL1P53675 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
CLTCL1P53675 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
CLTCL1P53675 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC22.83■■□□□ 1.24
CLTCL1P53675 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
CLTCL1P53675 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC22.83■■□□□ 1.24
CLTCL1P53675 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC22.82■■□□□ 1.24
CLTCL1P53675 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC22.82■■□□□ 1.24
CLTCL1P53675 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC22.82■■□□□ 1.24
CLTCL1P53675 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC22.82■■□□□ 1.24
CLTCL1P53675 ATF5-205ENST00000600336 682 ntTSL 2 BASIC22.82■■□□□ 1.24
CLTCL1P53675 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC22.82■■□□□ 1.24
CLTCL1P53675 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CLTCL1P53675 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC22.82■■□□□ 1.24
CLTCL1P53675 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC22.82■■□□□ 1.24
CLTCL1P53675 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CLTCL1P53675 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CLTCL1P53675 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CLTCL1P53675 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CLTCL1P53675 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
CLTCL1P53675 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CLTCL1P53675 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC22.82■■□□□ 1.24
CLTCL1P53675 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
CLTCL1P53675 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CLTCL1P53675 RPF1-202ENST00000370656 724 ntTSL 2 BASIC22.82■■□□□ 1.24
CLTCL1P53675 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC22.82■■□□□ 1.24
CLTCL1P53675 AL355994.2-201ENST00000447882 704 ntBASIC22.82■■□□□ 1.24
CLTCL1P53675 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC22.82■■□□□ 1.24
CLTCL1P53675 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC22.82■■□□□ 1.24
CLTCL1P53675 PTP4A1P2-201ENST00000546033 454 ntBASIC22.82■■□□□ 1.24
CLTCL1P53675 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
CLTCL1P53675 AL606495.2-201ENST00000605867 535 ntBASIC22.82■■□□□ 1.24
CLTCL1P53675 AL022328.1-201ENST00000610050 478 ntBASIC22.82■■□□□ 1.24
CLTCL1P53675 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC22.82■■□□□ 1.24
CLTCL1P53675 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC22.82■■□□□ 1.24
CLTCL1P53675 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CLTCL1P53675 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CLTCL1P53675 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CLTCL1P53675 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CLTCL1P53675 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CLTCL1P53675 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CLTCL1P53675 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CLTCL1P53675 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CLTCL1P53675 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CLTCL1P53675 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CLTCL1P53675 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CLTCL1P53675 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CLTCL1P53675 TEX30-203ENST00000376022 828 ntTSL 2 BASIC22.81■■□□□ 1.24
CLTCL1P53675 MIR648-201ENST00000385046 94 ntBASIC22.81■■□□□ 1.24
CLTCL1P53675 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC22.81■■□□□ 1.24
CLTCL1P53675 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC22.81■■□□□ 1.24
CLTCL1P53675 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC22.81■■□□□ 1.24
CLTCL1P53675 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
CLTCL1P53675 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC22.81■■□□□ 1.24
CLTCL1P53675 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CLTCL1P53675 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC22.81■■□□□ 1.24
CLTCL1P53675 MTHFR-217ENST00000641820 1569 ntBASIC22.81■■□□□ 1.24
CLTCL1P53675 AC106820.2-201ENST00000563775 3264 ntBASIC22.81■■□□□ 1.24
CLTCL1P53675 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CLTCL1P53675 AC018892.3-201ENST00000623986 2499 ntBASIC22.8■■□□□ 1.24
CLTCL1P53675 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CLTCL1P53675 USE1-206ENST00000595101 1776 ntTSL 2 BASIC22.8■■□□□ 1.24
CLTCL1P53675 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CLTCL1P53675 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 STX1A-203ENST00000395155 783 ntTSL 2 BASIC22.8■■□□□ 1.24
CLTCL1P53675 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC22.8■■□□□ 1.24
CLTCL1P53675 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 APRT-204ENST00000563655 709 ntTSL 5 BASIC22.8■■□□□ 1.24
CLTCL1P53675 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC22.8■■□□□ 1.24
CLTCL1P53675 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
CLTCL1P53675 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CLTCL1P53675 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC22.8■■□□□ 1.24
CLTCL1P53675 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CLTCL1P53675 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC22.79■■□□□ 1.24
CLTCL1P53675 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CLTCL1P53675 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC22.79■■□□□ 1.24
CLTCL1P53675 RPL7P3-201ENST00000441388 714 ntBASIC22.79■■□□□ 1.24
CLTCL1P53675 BCRP2-202ENST00000447763 634 ntBASIC22.79■■□□□ 1.24
CLTCL1P53675 CSF2RBP1-201ENST00000447905 391 ntBASIC22.79■■□□□ 1.24
CLTCL1P53675 RPL13AP25-201ENST00000484130 612 ntBASIC22.79■■□□□ 1.24
CLTCL1P53675 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CLTCL1P53675 BCRP6-201ENST00000510112 632 ntBASIC22.79■■□□□ 1.24
CLTCL1P53675 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC22.79■■□□□ 1.24
CLTCL1P53675 BCRP7-201ENST00000511549 544 ntBASIC22.79■■□□□ 1.24
CLTCL1P53675 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC22.79■■□□□ 1.24
CLTCL1P53675 PACS1-203ENST00000524815 628 ntTSL 4 BASIC22.79■■□□□ 1.24
CLTCL1P53675 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC22.79■■□□□ 1.24
CLTCL1P53675 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CLTCL1P53675 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC22.79■■□□□ 1.24
CLTCL1P53675 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms