Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6CP51160 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.61■□□□□ 0.41
PDE6CP51160 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.61■□□□□ 0.41
PDE6CP51160 AC022188.1-201ENST00000620960 1664 ntBASIC17.61■□□□□ 0.41
PDE6CP51160 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDE6CP51160 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6CP51160 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.6■□□□□ 0.41
PDE6CP51160 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PDE6CP51160 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.6■□□□□ 0.41
PDE6CP51160 TSEN15P1-201ENST00000423257 515 ntBASIC17.6■□□□□ 0.41
PDE6CP51160 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.6■□□□□ 0.41
PDE6CP51160 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.6■□□□□ 0.41
PDE6CP51160 SPDYE11-202ENST00000450699 704 ntBASIC17.6■□□□□ 0.41
PDE6CP51160 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PDE6CP51160 SPDYE9P-201ENST00000570642 692 ntBASIC17.6■□□□□ 0.41
PDE6CP51160 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.6■□□□□ 0.41
PDE6CP51160 AC022145.2-201ENST00000598203 171 ntBASIC17.6■□□□□ 0.41
PDE6CP51160 SPDYE10P-202ENST00000612005 668 ntBASIC17.6■□□□□ 0.41
PDE6CP51160 SPDYE8P-202ENST00000612377 668 ntBASIC17.6■□□□□ 0.41
PDE6CP51160 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6CP51160 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.6■□□□□ 0.41
PDE6CP51160 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDE6CP51160 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PDE6CP51160 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.6■□□□□ 0.41
PDE6CP51160 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.6■□□□□ 0.41
PDE6CP51160 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 AC005622.1-201ENST00000636801 1703 ntBASIC17.6■□□□□ 0.41
PDE6CP51160 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.6■□□□□ 0.41
PDE6CP51160 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDE6CP51160 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDE6CP51160 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6CP51160 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6CP51160 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PDE6CP51160 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6CP51160 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6CP51160 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6CP51160 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 AC004461.1-201ENST00000412461 403 ntBASIC17.59■□□□□ 0.41
PDE6CP51160 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6CP51160 AL645939.2-201ENST00000427340 991 ntBASIC17.59■□□□□ 0.41
PDE6CP51160 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 ADH5P3-201ENST00000433842 1137 ntBASIC17.59■□□□□ 0.41
PDE6CP51160 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.59■□□□□ 0.41
PDE6CP51160 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.59■□□□□ 0.41
PDE6CP51160 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDE6CP51160 RARRES2P8-201ENST00000566335 367 ntBASIC17.59■□□□□ 0.41
PDE6CP51160 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.59■□□□□ 0.41
PDE6CP51160 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6CP51160 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.59■□□□□ 0.41
PDE6CP51160 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PDE6CP51160 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
PDE6CP51160 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDE6CP51160 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDE6CP51160 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDE6CP51160 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.58■□□□□ 0.41
PDE6CP51160 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PDE6CP51160 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDE6CP51160 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PDE6CP51160 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
PDE6CP51160 AC007950.2-201ENST00000615045 2347 ntBASIC17.58■□□□□ 0.41
PDE6CP51160 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms