Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.3□□□□□ -0.28
CEACAM3P40198 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.3□□□□□ -0.28
CEACAM3P40198 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.3□□□□□ -0.28
CEACAM3P40198 AL662844.4-201ENST00000606367 2838 ntBASIC13.3□□□□□ -0.28
CEACAM3P40198 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
CEACAM3P40198 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.3□□□□□ -0.28
CEACAM3P40198 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.3□□□□□ -0.28
CEACAM3P40198 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.3□□□□□ -0.28
CEACAM3P40198 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.3□□□□□ -0.28
CEACAM3P40198 AC098859.1-201ENST00000502915 1238 ntBASIC13.3□□□□□ -0.28
CEACAM3P40198 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.3□□□□□ -0.28
CEACAM3P40198 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.3□□□□□ -0.28
CEACAM3P40198 AC243562.1-201ENST00000560672 389 ntBASIC13.3□□□□□ -0.28
CEACAM3P40198 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.3□□□□□ -0.28
CEACAM3P40198 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CEACAM3P40198 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CEACAM3P40198 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.3□□□□□ -0.28
CEACAM3P40198 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.3□□□□□ -0.28
CEACAM3P40198 AC105339.1-204ENST00000636249 355 ntBASIC13.3□□□□□ -0.28
CEACAM3P40198 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CEACAM3P40198 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.3□□□□□ -0.28
CEACAM3P40198 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CEACAM3P40198 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CEACAM3P40198 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.3□□□□□ -0.28
CEACAM3P40198 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
CEACAM3P40198 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.3□□□□□ -0.28
CEACAM3P40198 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CEACAM3P40198 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM3P40198 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 AL136379.1-201ENST00000623471 2642 ntBASIC13.29□□□□□ -0.28
CEACAM3P40198 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM3P40198 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 ALOX12P2-203ENST00000570921 1945 ntBASIC13.29□□□□□ -0.28
CEACAM3P40198 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CEACAM3P40198 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CEACAM3P40198 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.29□□□□□ -0.28
CEACAM3P40198 SPCS2P4-201ENST00000436160 681 ntBASIC13.29□□□□□ -0.28
CEACAM3P40198 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 AP006288.1-201ENST00000446065 395 ntBASIC13.29□□□□□ -0.28
CEACAM3P40198 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.29□□□□□ -0.28
CEACAM3P40198 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM3P40198 KRT8P48-201ENST00000515599 1220 ntBASIC13.29□□□□□ -0.28
CEACAM3P40198 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.29□□□□□ -0.28
CEACAM3P40198 AC073389.1-201ENST00000595595 795 ntBASIC13.29□□□□□ -0.28
CEACAM3P40198 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 AL513210.1-201ENST00000629608 234 ntBASIC13.29□□□□□ -0.28
CEACAM3P40198 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.29□□□□□ -0.28
CEACAM3P40198 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM3P40198 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM3P40198 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM3P40198 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM3P40198 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.29□□□□□ -0.28
CEACAM3P40198 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM3P40198 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM3P40198 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms