Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 AC243562.2-201ENST00000561247 970 ntBASIC20.49■□□□□ 0.87
ATP6V1AP38606 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 AC124283.3-201ENST00000570869 594 ntBASIC20.49■□□□□ 0.87
ATP6V1AP38606 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.49■□□□□ 0.87
ATP6V1AP38606 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V1AP38606 AC139713.2-201ENST00000641328 2723 ntBASIC20.48■□□□□ 0.87
ATP6V1AP38606 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 HAUS4P1-201ENST00000406739 1145 ntBASIC20.48■□□□□ 0.87
ATP6V1AP38606 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 AC007551.1-201ENST00000457394 519 ntBASIC20.48■□□□□ 0.87
ATP6V1AP38606 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.48■□□□□ 0.87
ATP6V1AP38606 INTS4P2-202ENST00000614726 2019 ntBASIC20.48■□□□□ 0.87
ATP6V1AP38606 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATP6V1AP38606 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V1AP38606 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V1AP38606 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V1AP38606 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V1AP38606 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V1AP38606 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V1AP38606 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 SOCS2P1-201ENST00000417727 557 ntBASIC20.47■□□□□ 0.87
ATP6V1AP38606 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 AL355864.2-201ENST00000447420 863 ntBASIC20.47■□□□□ 0.87
ATP6V1AP38606 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 AP000812.2-201ENST00000538934 718 ntBASIC20.47■□□□□ 0.87
ATP6V1AP38606 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V1AP38606 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 AC009053.2-201ENST00000563701 2365 ntBASIC20.47■□□□□ 0.87
ATP6V1AP38606 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V1AP38606 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V1AP38606 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ATP6V1AP38606 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms