Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.54■□□□□ 0.08
KRT20P35900 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 AC006277.1-201ENST00000624348 1610 ntBASIC15.54■□□□□ 0.08
KRT20P35900 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
KRT20P35900 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 AC006538.1-201ENST00000567905 1585 ntBASIC15.53■□□□□ 0.08
KRT20P35900 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT20P35900 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.53■□□□□ 0.08
KRT20P35900 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.53■□□□□ 0.08
KRT20P35900 ME2P1-201ENST00000426028 1970 ntBASIC15.53■□□□□ 0.08
KRT20P35900 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
KRT20P35900 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.53■□□□□ 0.08
KRT20P35900 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT20P35900 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT20P35900 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
KRT20P35900 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
KRT20P35900 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.53■□□□□ 0.08
KRT20P35900 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.53■□□□□ 0.08
KRT20P35900 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT20P35900 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 KRT18P3-201ENST00000451602 1288 ntBASIC15.53■□□□□ 0.08
KRT20P35900 KRT18P58-201ENST00000527480 1120 ntBASIC15.53■□□□□ 0.08
KRT20P35900 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.53■□□□□ 0.08
KRT20P35900 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.53■□□□□ 0.08
KRT20P35900 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
KRT20P35900 AC140113.2-201ENST00000604370 208 ntBASIC15.53■□□□□ 0.08
KRT20P35900 AC023141.13-201ENST00000604991 943 ntBASIC15.53■□□□□ 0.08
KRT20P35900 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.53■□□□□ 0.08
KRT20P35900 AL645728.2-201ENST00000641974 660 ntBASIC15.53■□□□□ 0.08
KRT20P35900 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
KRT20P35900 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
KRT20P35900 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
KRT20P35900 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
KRT20P35900 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
KRT20P35900 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
KRT20P35900 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
KRT20P35900 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT20P35900 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
KRT20P35900 AC126177.1-201ENST00000547829 2218 ntBASIC15.52■□□□□ 0.08
KRT20P35900 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
KRT20P35900 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT20P35900 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.52■□□□□ 0.08
KRT20P35900 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.52■□□□□ 0.08
KRT20P35900 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
KRT20P35900 PMS2P1-201ENST00000431037 1228 ntBASIC15.52■□□□□ 0.08
KRT20P35900 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
KRT20P35900 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT20P35900 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
KRT20P35900 MIR4515-201ENST00000584082 81 ntBASIC15.52■□□□□ 0.08
KRT20P35900 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT20P35900 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.52■□□□□ 0.08
KRT20P35900 AC013467.2-201ENST00000605472 835 ntBASIC15.52■□□□□ 0.08
KRT20P35900 ACTL9-202ENST00000612068 1252 ntBASIC15.52■□□□□ 0.08
KRT20P35900 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.52■□□□□ 0.08
KRT20P35900 AC010507.1-201ENST00000633895 436 ntBASIC15.52■□□□□ 0.08
KRT20P35900 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT20P35900 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
KRT20P35900 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT20P35900 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.52■□□□□ 0.07
KRT20P35900 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
KRT20P35900 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
KRT20P35900 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT20P35900 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.52■□□□□ 0.07
KRT20P35900 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
KRT20P35900 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT20P35900 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms