Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RFC1P35251 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 TFAMP1-201ENST00000412727 736 ntBASIC17.15■□□□□ 0.34
RFC1P35251 AL135744.1-201ENST00000565098 629 ntBASIC17.15■□□□□ 0.34
RFC1P35251 MTDHP5-201ENST00000598980 586 ntBASIC17.15■□□□□ 0.34
RFC1P35251 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.15■□□□□ 0.34
RFC1P35251 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.15■□□□□ 0.34
RFC1P35251 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.15■□□□□ 0.34
RFC1P35251 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RFC1P35251 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.14■□□□□ 0.34
RFC1P35251 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
RFC1P35251 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RFC1P35251 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.34
RFC1P35251 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RFC1P35251 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.14■□□□□ 0.33
RFC1P35251 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.14■□□□□ 0.33
RFC1P35251 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.14■□□□□ 0.33
RFC1P35251 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFC1P35251 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 YBX2P1-201ENST00000394192 760 ntBASIC17.14■□□□□ 0.33
RFC1P35251 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
RFC1P35251 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFC1P35251 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.14■□□□□ 0.33
RFC1P35251 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.14■□□□□ 0.33
RFC1P35251 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.14■□□□□ 0.33
RFC1P35251 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.14■□□□□ 0.33
RFC1P35251 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.14■□□□□ 0.33
RFC1P35251 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.14■□□□□ 0.33
RFC1P35251 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.14■□□□□ 0.33
RFC1P35251 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFC1P35251 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFC1P35251 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RFC1P35251 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.14■□□□□ 0.33
RFC1P35251 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.14■□□□□ 0.33
RFC1P35251 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.14■□□□□ 0.33
RFC1P35251 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
RFC1P35251 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.13■□□□□ 0.33
RFC1P35251 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFC1P35251 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC1P35251 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RFC1P35251 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 AC007950.2-201ENST00000615045 2347 ntBASIC17.13■□□□□ 0.33
RFC1P35251 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC1P35251 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.13■□□□□ 0.33
RFC1P35251 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 ALG1L5P-201ENST00000482043 771 ntBASIC17.13■□□□□ 0.33
RFC1P35251 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.13■□□□□ 0.33
RFC1P35251 AC243562.1-201ENST00000560672 389 ntBASIC17.13■□□□□ 0.33
RFC1P35251 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.13■□□□□ 0.33
RFC1P35251 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC1P35251 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.13■□□□□ 0.33
RFC1P35251 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RFC1P35251 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC1P35251 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.13■□□□□ 0.33
RFC1P35251 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC1P35251 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RFC1P35251 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RFC1P35251 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC1P35251 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFC1P35251 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
RFC1P35251 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms