Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.73□□□□□ -0.21
COL8A2P25067 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 DOC2GP-204ENST00000639052 2548 ntBASIC13.73□□□□□ -0.21
COL8A2P25067 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
COL8A2P25067 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.73□□□□□ -0.21
COL8A2P25067 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
COL8A2P25067 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
COL8A2P25067 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
COL8A2P25067 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.73□□□□□ -0.21
COL8A2P25067 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
COL8A2P25067 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
COL8A2P25067 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
COL8A2P25067 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.72□□□□□ -0.21
COL8A2P25067 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
COL8A2P25067 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.72□□□□□ -0.21
COL8A2P25067 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.72□□□□□ -0.21
COL8A2P25067 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.72□□□□□ -0.21
COL8A2P25067 MIR661-201ENST00000384842 89 ntBASIC13.72□□□□□ -0.21
COL8A2P25067 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
COL8A2P25067 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.72□□□□□ -0.21
COL8A2P25067 RPL37AP1-201ENST00000412502 279 ntBASIC13.72□□□□□ -0.21
COL8A2P25067 AC004890.2-204ENST00000481968 304 ntBASIC13.72□□□□□ -0.21
COL8A2P25067 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.72□□□□□ -0.21
COL8A2P25067 AC061975.2-201ENST00000581722 295 ntBASIC13.72□□□□□ -0.21
COL8A2P25067 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.72□□□□□ -0.21
COL8A2P25067 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.72□□□□□ -0.21
COL8A2P25067 AL133215.2-201ENST00000609242 977 ntBASIC13.72□□□□□ -0.21
COL8A2P25067 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
COL8A2P25067 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.72□□□□□ -0.21
COL8A2P25067 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
COL8A2P25067 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.72□□□□□ -0.21
COL8A2P25067 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.72□□□□□ -0.21
COL8A2P25067 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
COL8A2P25067 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
COL8A2P25067 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.72□□□□□ -0.21
COL8A2P25067 CETN4P-206ENST00000642099 2168 ntBASIC13.72□□□□□ -0.21
COL8A2P25067 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
COL8A2P25067 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
COL8A2P25067 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
COL8A2P25067 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.71□□□□□ -0.21
COL8A2P25067 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
COL8A2P25067 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
COL8A2P25067 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
COL8A2P25067 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.71□□□□□ -0.21
COL8A2P25067 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
COL8A2P25067 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
COL8A2P25067 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.71□□□□□ -0.21
COL8A2P25067 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.71□□□□□ -0.21
COL8A2P25067 TSSK5P-201ENST00000423978 907 ntBASIC13.71□□□□□ -0.21
COL8A2P25067 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.71□□□□□ -0.21
COL8A2P25067 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 AC002472.2-201ENST00000442739 958 ntBASIC13.71□□□□□ -0.21
COL8A2P25067 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
COL8A2P25067 HLA-V-204ENST00000476601 1289 ntBASIC13.71□□□□□ -0.21
COL8A2P25067 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.71□□□□□ -0.21
COL8A2P25067 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.71□□□□□ -0.21
COL8A2P25067 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.71□□□□□ -0.21
COL8A2P25067 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.71□□□□□ -0.21
COL8A2P25067 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.71□□□□□ -0.21
COL8A2P25067 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.71□□□□□ -0.21
COL8A2P25067 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.71□□□□□ -0.21
COL8A2P25067 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL8A2P25067 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL8A2P25067 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL8A2P25067 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
COL8A2P25067 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.71□□□□□ -0.22
COL8A2P25067 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms