Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.18■□□□□ 0.5
GGPS1O95749 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.18■□□□□ 0.5
GGPS1O95749 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.18■□□□□ 0.5
GGPS1O95749 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.18■□□□□ 0.5
GGPS1O95749 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GGPS1O95749 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.18■□□□□ 0.5
GGPS1O95749 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.18■□□□□ 0.5
GGPS1O95749 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
GGPS1O95749 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
GGPS1O95749 FLJ38576-201ENST00000623820 2459 ntBASIC18.17■□□□□ 0.5
GGPS1O95749 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.17■□□□□ 0.5
GGPS1O95749 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.17■□□□□ 0.5
GGPS1O95749 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
GGPS1O95749 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 AC114501.2-201ENST00000439631 535 ntBASIC18.17■□□□□ 0.5
GGPS1O95749 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GGPS1O95749 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.17■□□□□ 0.5
GGPS1O95749 API5-211ENST00000534695 560 ntTSL 5 BASIC18.17■□□□□ 0.5
GGPS1O95749 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.17■□□□□ 0.5
GGPS1O95749 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.17■□□□□ 0.5
GGPS1O95749 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.17■□□□□ 0.5
GGPS1O95749 MIR6069-201ENST00000620069 79 ntBASIC18.17■□□□□ 0.5
GGPS1O95749 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
GGPS1O95749 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
GGPS1O95749 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GGPS1O95749 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.16■□□□□ 0.5
GGPS1O95749 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
GGPS1O95749 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.16■□□□□ 0.5
GGPS1O95749 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
GGPS1O95749 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 SPDYE19P-201ENST00000338590 713 ntBASIC18.16■□□□□ 0.5
GGPS1O95749 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GGPS1O95749 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.16■□□□□ 0.5
GGPS1O95749 AL353779.1-201ENST00000434793 351 ntBASIC18.16■□□□□ 0.5
GGPS1O95749 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.16■□□□□ 0.5
GGPS1O95749 DOC2GP-202ENST00000514950 1163 ntBASIC18.16■□□□□ 0.5
GGPS1O95749 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
GGPS1O95749 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.16■□□□□ 0.5
GGPS1O95749 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 TP53TG3HP-202ENST00000569755 579 ntBASIC18.16■□□□□ 0.5
GGPS1O95749 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.16■□□□□ 0.5
GGPS1O95749 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
GGPS1O95749 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.16■□□□□ 0.5
GGPS1O95749 AL109936.8-201ENST00000641772 604 ntBASIC18.16■□□□□ 0.5
GGPS1O95749 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.16■□□□□ 0.5
GGPS1O95749 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.16■□□□□ 0.5
GGPS1O95749 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 CYP4F24P-201ENST00000586049 1580 ntBASIC18.16■□□□□ 0.5
GGPS1O95749 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.16■□□□□ 0.5
GGPS1O95749 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GGPS1O95749 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
GGPS1O95749 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.15■□□□□ 0.5
GGPS1O95749 PCDHB19P-201ENST00000570871 2371 ntBASIC18.15■□□□□ 0.5
GGPS1O95749 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 AC092171.3-201ENST00000610122 2651 ntBASIC18.15■□□□□ 0.5
GGPS1O95749 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GGPS1O95749 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms