Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AP002490.2-201ENST00000524791 560 ntBASIC23.89■■□□□ 1.41
RAPGEF3O95398 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC23.89■■□□□ 1.41
RAPGEF3O95398 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RAPGEF3O95398 CU633904.3-201ENST00000624042 1029 ntBASIC23.89■■□□□ 1.41
RAPGEF3O95398 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.41
RAPGEF3O95398 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
RAPGEF3O95398 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RAPGEF3O95398 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
RAPGEF3O95398 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RAPGEF3O95398 AL603756.1-201ENST00000606511 2163 ntBASIC23.89■■□□□ 1.41
RAPGEF3O95398 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RAPGEF3O95398 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
RAPGEF3O95398 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
RAPGEF3O95398 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 AC134043.2-201ENST00000624206 2238 ntBASIC23.88■■□□□ 1.41
RAPGEF3O95398 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
RAPGEF3O95398 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 NKAIN1P1-201ENST00000435754 582 ntBASIC23.88■■□□□ 1.41
RAPGEF3O95398 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC23.88■■□□□ 1.41
RAPGEF3O95398 HSPB1P2-201ENST00000448722 546 ntBASIC23.88■■□□□ 1.41
RAPGEF3O95398 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC23.88■■□□□ 1.41
RAPGEF3O95398 RNA5SP486-201ENST00000515961 83 ntBASIC23.88■■□□□ 1.41
RAPGEF3O95398 AC134698.3-201ENST00000523880 214 ntBASIC23.88■■□□□ 1.41
RAPGEF3O95398 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC23.88■■□□□ 1.41
RAPGEF3O95398 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC23.88■■□□□ 1.41
RAPGEF3O95398 AC107373.2-201ENST00000607735 490 ntBASIC23.88■■□□□ 1.41
RAPGEF3O95398 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC23.88■■□□□ 1.41
RAPGEF3O95398 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC23.88■■□□□ 1.41
RAPGEF3O95398 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAPGEF3O95398 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC23.87■■□□□ 1.41
RAPGEF3O95398 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC23.87■■□□□ 1.41
RAPGEF3O95398 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC23.87■■□□□ 1.41
RAPGEF3O95398 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC23.87■■□□□ 1.41
RAPGEF3O95398 AC093813.1-201ENST00000605066 256 ntBASIC23.87■■□□□ 1.41
RAPGEF3O95398 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC23.87■■□□□ 1.41
RAPGEF3O95398 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 AL121723.1-201ENST00000445194 1519 ntBASIC23.87■■□□□ 1.41
RAPGEF3O95398 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC23.87■■□□□ 1.41
RAPGEF3O95398 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC23.87■■□□□ 1.41
RAPGEF3O95398 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF3O95398 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF3O95398 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF3O95398 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF3O95398 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF3O95398 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF3O95398 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF3O95398 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF3O95398 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 LBH-202ENST00000401506 485 ntTSL 3 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 FTLP1-201ENST00000449155 526 ntBASIC23.86■■□□□ 1.41
RAPGEF3O95398 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 FGFR3P5-201ENST00000564496 886 ntBASIC23.86■■□□□ 1.41
RAPGEF3O95398 MIR3907-201ENST00000579424 151 ntBASIC23.86■■□□□ 1.41
RAPGEF3O95398 AP003419.4-201ENST00000616071 517 ntBASIC23.86■■□□□ 1.41
RAPGEF3O95398 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF3O95398 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 LINC01144-201ENST00000626198 1710 ntBASIC23.86■■□□□ 1.41
RAPGEF3O95398 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF3O95398 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF3O95398 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC23.86■■□□□ 1.41
RAPGEF3O95398 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.85■■□□□ 1.41
RAPGEF3O95398 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF3O95398 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC23.85■■□□□ 1.41
RAPGEF3O95398 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF3O95398 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RAPGEF3O95398 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC23.85■■□□□ 1.41
RAPGEF3O95398 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF3O95398 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF3O95398 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms