Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF253O75346 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ZNF253O75346 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.75□□□□□ -0.37
ZNF253O75346 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF253O75346 AL022326.1-202ENST00000641533 845 ntBASIC12.75□□□□□ -0.37
ZNF253O75346 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF253O75346 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 AC087386.2-201ENST00000623212 4637 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ZNF253O75346 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ZNF253O75346 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
ZNF253O75346 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF253O75346 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF253O75346 AP005117.1-201ENST00000584346 1413 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 IER3-202ENST00000376377 1350 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.74□□□□□ -0.37
ZNF253O75346 KRT16P4-201ENST00000453883 522 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF253O75346 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.74□□□□□ -0.37
ZNF253O75346 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
ZNF253O75346 AC091167.2-201ENST00000579581 588 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 AL591684.3-201ENST00000605187 298 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 AL589182.2-201ENST00000619332 1049 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 AL139288.1-201ENST00000623748 933 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZNF253O75346 AF228730.7-201ENST00000641842 219 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF253O75346 SNX18-202ENST00000343017 3140 ntBASIC12.74□□□□□ -0.37
ZNF253O75346 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF253O75346 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF253O75346 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF253O75346 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZNF253O75346 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.73□□□□□ -0.37
ZNF253O75346 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
ZNF253O75346 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZNF253O75346 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 AC013268.4-201ENST00000637413 2228 ntBASIC12.73□□□□□ -0.37
ZNF253O75346 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 KRT8P39-201ENST00000396270 1433 ntBASIC12.73□□□□□ -0.37
ZNF253O75346 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF253O75346 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
ZNF253O75346 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF253O75346 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
ZNF253O75346 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF253O75346 PAWRP1-201ENST00000451083 565 ntBASIC12.73□□□□□ -0.37
ZNF253O75346 POU5F1P6-201ENST00000466990 990 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms