Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 AC131009.4-201ENST00000624048 1740 ntBASIC13.33□□□□□ -0.28
SSSCA1O60232 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SSSCA1O60232 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 AL109954.1-202ENST00000564051 2148 ntBASIC13.33□□□□□ -0.28
SSSCA1O60232 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.33□□□□□ -0.28
SSSCA1O60232 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSSCA1O60232 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SSSCA1O60232 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.32□□□□□ -0.28
SSSCA1O60232 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.32□□□□□ -0.28
SSSCA1O60232 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SSSCA1O60232 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SSSCA1O60232 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
SSSCA1O60232 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.32□□□□□ -0.28
SSSCA1O60232 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SSSCA1O60232 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 AC092919.2-201ENST00000623631 1645 ntBASIC13.32□□□□□ -0.28
SSSCA1O60232 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.32□□□□□ -0.28
SSSCA1O60232 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.32□□□□□ -0.28
SSSCA1O60232 RCN1P2-201ENST00000398357 915 ntBASIC13.32□□□□□ -0.28
SSSCA1O60232 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SSSCA1O60232 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.32□□□□□ -0.28
SSSCA1O60232 NTF6B-201ENST00000591913 560 ntBASIC13.32□□□□□ -0.28
SSSCA1O60232 AC010331.1-201ENST00000611423 582 ntBASIC13.32□□□□□ -0.28
SSSCA1O60232 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.32□□□□□ -0.28
SSSCA1O60232 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.32□□□□□ -0.28
SSSCA1O60232 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SSSCA1O60232 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.32□□□□□ -0.28
SSSCA1O60232 TMBIM7P-203ENST00000641617 1718 ntBASIC13.32□□□□□ -0.28
SSSCA1O60232 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SSSCA1O60232 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SSSCA1O60232 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.32□□□□□ -0.28
SSSCA1O60232 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.32□□□□□ -0.28
SSSCA1O60232 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SSSCA1O60232 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SSSCA1O60232 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.32□□□□□ -0.28
SSSCA1O60232 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SSSCA1O60232 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SSSCA1O60232 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SSSCA1O60232 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.31□□□□□ -0.28
SSSCA1O60232 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
SSSCA1O60232 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.31□□□□□ -0.28
SSSCA1O60232 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.31□□□□□ -0.28
SSSCA1O60232 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.31□□□□□ -0.28
SSSCA1O60232 AC005521.1-201ENST00000393351 872 ntBASIC13.31□□□□□ -0.28
SSSCA1O60232 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
SSSCA1O60232 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.31□□□□□ -0.28
SSSCA1O60232 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 Z69720.1-201ENST00000601483 472 ntBASIC13.31□□□□□ -0.28
SSSCA1O60232 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.31□□□□□ -0.28
SSSCA1O60232 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SSSCA1O60232 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.31□□□□□ -0.28
SSSCA1O60232 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SSSCA1O60232 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SSSCA1O60232 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.31□□□□□ -0.28
SSSCA1O60232 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
SSSCA1O60232 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SSSCA1O60232 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms