Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCL13O43927 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.54□□□□□ -0.08
CXCL13O43927 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
CXCL13O43927 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CXCL13O43927 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.54□□□□□ -0.08
CXCL13O43927 MTND6P24-201ENST00000440466 518 ntBASIC14.54□□□□□ -0.08
CXCL13O43927 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CXCL13O43927 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.54□□□□□ -0.08
CXCL13O43927 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.54□□□□□ -0.08
CXCL13O43927 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.54□□□□□ -0.08
CXCL13O43927 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.54□□□□□ -0.08
CXCL13O43927 AC140878.1-201ENST00000565277 250 ntBASIC14.54□□□□□ -0.08
CXCL13O43927 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.54□□□□□ -0.08
CXCL13O43927 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCL13O43927 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 MIR4321-201ENST00000592276 80 ntBASIC14.54□□□□□ -0.08
CXCL13O43927 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CXCL13O43927 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCL13O43927 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CXCL13O43927 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CXCL13O43927 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.54□□□□□ -0.08
CXCL13O43927 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CXCL13O43927 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCL13O43927 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.54□□□□□ -0.08
CXCL13O43927 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CXCL13O43927 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.54□□□□□ -0.08
CXCL13O43927 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CXCL13O43927 AC006449.6-201ENST00000612330 2296 ntBASIC14.54□□□□□ -0.08
CXCL13O43927 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CXCL13O43927 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CXCL13O43927 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CXCL13O43927 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCL13O43927 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CXCL13O43927 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCL13O43927 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CXCL13O43927 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCL13O43927 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CXCL13O43927 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 MIR943-201ENST00000401286 94 ntBASIC14.53□□□□□ -0.08
CXCL13O43927 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCL13O43927 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCL13O43927 AC105021.1-202ENST00000570572 669 ntBASIC14.53□□□□□ -0.08
CXCL13O43927 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.53□□□□□ -0.08
CXCL13O43927 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCL13O43927 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CXCL13O43927 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CXCL13O43927 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CXCL13O43927 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.53□□□□□ -0.08
CXCL13O43927 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CXCL13O43927 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms