Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 AC141586.5-201ENST00000624546 2050 ntBASIC10.78□□□□□ -0.68
RTL8CO15255 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.78□□□□□ -0.68
RTL8CO15255 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
RTL8CO15255 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
RTL8CO15255 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 KRT43P-201ENST00000434019 910 ntBASIC10.78□□□□□ -0.68
RTL8CO15255 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC10.78□□□□□ -0.68
RTL8CO15255 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC10.78□□□□□ -0.68
RTL8CO15255 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 GALT-202ENST00000450095 1280 ntTSL 2 BASIC10.78□□□□□ -0.68
RTL8CO15255 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC10.78□□□□□ -0.68
RTL8CO15255 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.78□□□□□ -0.68
RTL8CO15255 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.78□□□□□ -0.68
RTL8CO15255 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.78□□□□□ -0.68
RTL8CO15255 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC10.78□□□□□ -0.68
RTL8CO15255 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC10.78□□□□□ -0.68
RTL8CO15255 RN7SL219P-201ENST00000582872 296 ntBASIC10.78□□□□□ -0.68
RTL8CO15255 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 BTNL10-201ENST00000595971 695 ntBASIC10.78□□□□□ -0.68
RTL8CO15255 AC010319.3-201ENST00000597028 470 ntBASIC10.78□□□□□ -0.68
RTL8CO15255 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 MIR6787-201ENST00000616675 61 ntBASIC10.78□□□□□ -0.68
RTL8CO15255 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 CLK3P2-201ENST00000427566 1453 ntBASIC10.78□□□□□ -0.68
RTL8CO15255 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 PP12613-201ENST00000424958 2230 ntBASIC10.78□□□□□ -0.68
RTL8CO15255 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC10.78□□□□□ -0.68
RTL8CO15255 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC10.78□□□□□ -0.68
RTL8CO15255 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC10.78□□□□□ -0.68
RTL8CO15255 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC10.78□□□□□ -0.68
RTL8CO15255 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
RTL8CO15255 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
RTL8CO15255 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RTL8CO15255 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
RTL8CO15255 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
RTL8CO15255 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.68
RTL8CO15255 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RTL8CO15255 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
RTL8CO15255 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC10.77□□□□□ -0.68
RTL8CO15255 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC10.77□□□□□ -0.68
RTL8CO15255 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
RTL8CO15255 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC10.77□□□□□ -0.68
RTL8CO15255 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RTL8CO15255 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
RTL8CO15255 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
RTL8CO15255 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RTL8CO15255 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RTL8CO15255 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC10.77□□□□□ -0.68
RTL8CO15255 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
RTL8CO15255 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC10.77□□□□□ -0.68
RTL8CO15255 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTL8CO15255 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTL8CO15255 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTL8CO15255 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTL8CO15255 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTL8CO15255 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTL8CO15255 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTL8CO15255 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTL8CO15255 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
RTL8CO15255 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
RTL8CO15255 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RTL8CO15255 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.77□□□□□ -0.69
RTL8CO15255 NSL1-201ENST00000366976 722 ntTSL 2 BASIC10.77□□□□□ -0.69
RTL8CO15255 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms