Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASQ2O14958 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASQ2O14958 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CASQ2O14958 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
CASQ2O14958 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CASQ2O14958 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 AC005912.2-201ENST00000619492 2400 ntBASIC15.49■□□□□ 0.07
CASQ2O14958 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.49■□□□□ 0.07
CASQ2O14958 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.49■□□□□ 0.07
CASQ2O14958 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.49■□□□□ 0.07
CASQ2O14958 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CASQ2O14958 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CASQ2O14958 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CASQ2O14958 AC012618.2-201ENST00000428058 849 ntBASIC15.49■□□□□ 0.07
CASQ2O14958 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CASQ2O14958 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.49■□□□□ 0.07
CASQ2O14958 AC128688.1-201ENST00000487626 519 ntBASIC15.49■□□□□ 0.07
CASQ2O14958 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.49■□□□□ 0.07
CASQ2O14958 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CASQ2O14958 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.49■□□□□ 0.07
CASQ2O14958 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CASQ2O14958 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.49■□□□□ 0.07
CASQ2O14958 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.49■□□□□ 0.07
CASQ2O14958 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.49■□□□□ 0.07
CASQ2O14958 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.49■□□□□ 0.07
CASQ2O14958 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.49■□□□□ 0.07
CASQ2O14958 AL138831.2-201ENST00000606564 490 ntBASIC15.49■□□□□ 0.07
CASQ2O14958 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CASQ2O14958 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.49■□□□□ 0.07
CASQ2O14958 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.49■□□□□ 0.07
CASQ2O14958 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASQ2O14958 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.48■□□□□ 0.07
CASQ2O14958 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CASQ2O14958 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.48■□□□□ 0.07
CASQ2O14958 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.48■□□□□ 0.07
CASQ2O14958 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 AC233702.5-201ENST00000584107 538 ntBASIC15.48■□□□□ 0.07
CASQ2O14958 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.48■□□□□ 0.07
CASQ2O14958 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASQ2O14958 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.48■□□□□ 0.07
CASQ2O14958 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CASQ2O14958 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms