Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APAF1O14727 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.34■■□□□ 1.01
APAF1O14727 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.34■■□□□ 1.01
APAF1O14727 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
APAF1O14727 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APAF1O14727 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APAF1O14727 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC21.34■■□□□ 1.01
APAF1O14727 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC21.34■■□□□ 1.01
APAF1O14727 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
APAF1O14727 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
APAF1O14727 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
APAF1O14727 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC21.34■■□□□ 1.01
APAF1O14727 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
APAF1O14727 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APAF1O14727 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APAF1O14727 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC21.34■■□□□ 1.01
APAF1O14727 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
APAF1O14727 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC21.34■■□□□ 1.01
APAF1O14727 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
APAF1O14727 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APAF1O14727 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.33■■□□□ 1.01
APAF1O14727 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APAF1O14727 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
APAF1O14727 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
APAF1O14727 AL691432.1-201ENST00000596308 1422 ntBASIC21.33■■□□□ 1.01
APAF1O14727 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APAF1O14727 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC21.33■■□□□ 1.01
APAF1O14727 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.33■■□□□ 1.01
APAF1O14727 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APAF1O14727 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APAF1O14727 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC21.33■■□□□ 1.01
APAF1O14727 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
APAF1O14727 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
APAF1O14727 AC069262.1-201ENST00000539058 672 ntBASIC21.33■■□□□ 1.01
APAF1O14727 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC21.33■■□□□ 1.01
APAF1O14727 AC003101.2-201ENST00000612557 442 ntBASIC21.33■■□□□ 1.01
APAF1O14727 AC093028.1-201ENST00000622998 982 ntBASIC21.33■■□□□ 1.01
APAF1O14727 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.33■■□□□ 1.01
APAF1O14727 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
APAF1O14727 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
APAF1O14727 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
APAF1O14727 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC21.33■■□□□ 1
APAF1O14727 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
APAF1O14727 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC21.33■■□□□ 1
APAF1O14727 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
APAF1O14727 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
APAF1O14727 KRT18P28-201ENST00000453838 1332 ntBASIC21.32■■□□□ 1
APAF1O14727 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
APAF1O14727 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APAF1O14727 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC21.32■■□□□ 1
APAF1O14727 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
APAF1O14727 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC21.32■■□□□ 1
APAF1O14727 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APAF1O14727 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APAF1O14727 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.32■■□□□ 1
APAF1O14727 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.32■■□□□ 1
APAF1O14727 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.32■■□□□ 1
APAF1O14727 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.32■■□□□ 1
APAF1O14727 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.32■■□□□ 1
APAF1O14727 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.32■■□□□ 1
APAF1O14727 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.32■■□□□ 1
APAF1O14727 MIR6080-201ENST00000617359 66 ntBASIC21.32■■□□□ 1
APAF1O14727 Z92544.3-201ENST00000624747 417 ntBASIC21.32■■□□□ 1
APAF1O14727 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
APAF1O14727 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APAF1O14727 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC21.32■■□□□ 1
APAF1O14727 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
APAF1O14727 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.31■■□□□ 1
APAF1O14727 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.31■■□□□ 1
APAF1O14727 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
APAF1O14727 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC21.31■■□□□ 1
APAF1O14727 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 METTL21AP1-201ENST00000438852 635 ntBASIC21.31■■□□□ 1
APAF1O14727 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.31■■□□□ 1
APAF1O14727 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.31■■□□□ 1
APAF1O14727 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.31■■□□□ 1
APAF1O14727 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.31■■□□□ 1
APAF1O14727 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.31■■□□□ 1
APAF1O14727 AC105021.1-202ENST00000570572 669 ntBASIC21.31■■□□□ 1
APAF1O14727 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.31■■□□□ 1
APAF1O14727 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.31■■□□□ 1
APAF1O14727 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC21.31■■□□□ 1
APAF1O14727 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.31■■□□□ 1
APAF1O14727 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APAF1O14727 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.3■■□□□ 1
APAF1O14727 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms