Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.97■□□□□ 0.15
CDC7O00311 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.97■□□□□ 0.15
CDC7O00311 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.97■□□□□ 0.15
CDC7O00311 AC002347.1-201ENST00000569543 541 ntBASIC15.97■□□□□ 0.15
CDC7O00311 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.97■□□□□ 0.15
CDC7O00311 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.97■□□□□ 0.15
CDC7O00311 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.97■□□□□ 0.15
CDC7O00311 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CDC7O00311 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.97■□□□□ 0.15
CDC7O00311 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CDC7O00311 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDC7O00311 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDC7O00311 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 HYMAI-201ENST00000635591 3347 ntBASIC15.97■□□□□ 0.15
CDC7O00311 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CDC7O00311 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.97■□□□□ 0.15
CDC7O00311 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CDC7O00311 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CDC7O00311 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CDC7O00311 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC7O00311 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.96■□□□□ 0.15
CDC7O00311 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.96■□□□□ 0.15
CDC7O00311 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 PMS2P7-201ENST00000506558 1336 ntBASIC15.96■□□□□ 0.15
CDC7O00311 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.96■□□□□ 0.15
CDC7O00311 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.96■□□□□ 0.15
CDC7O00311 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.96■□□□□ 0.15
CDC7O00311 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.96■□□□□ 0.15
CDC7O00311 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.96■□□□□ 0.15
CDC7O00311 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.96■□□□□ 0.15
CDC7O00311 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.96■□□□□ 0.15
CDC7O00311 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.96■□□□□ 0.15
CDC7O00311 AC091812.2-201ENST00000619081 385 ntBASIC15.96■□□□□ 0.15
CDC7O00311 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
CDC7O00311 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.96■□□□□ 0.15
CDC7O00311 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.96■□□□□ 0.15
CDC7O00311 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC7O00311 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CDC7O00311 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDC7O00311 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDC7O00311 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.96■□□□□ 0.14
CDC7O00311 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.96■□□□□ 0.14
CDC7O00311 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.95■□□□□ 0.14
CDC7O00311 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.95■□□□□ 0.14
CDC7O00311 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.95■□□□□ 0.14
CDC7O00311 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.95■□□□□ 0.14
CDC7O00311 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.95■□□□□ 0.14
CDC7O00311 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.95■□□□□ 0.14
CDC7O00311 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CDC7O00311 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDC7O00311 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDC7O00311 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDC7O00311 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDC7O00311 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC7O00311 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CDC7O00311 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.95■□□□□ 0.14
CDC7O00311 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms