Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 KRASP1-201ENST00000407852 552 ntBASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC233263.1-201ENST00000578059 224 ntBASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC092127.1-201ENST00000567093 3455 ntBASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CES1P1-201ENST00000421606 1704 ntBASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 INTS4P1-203ENST00000641008 3683 ntBASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC008622.2-201ENST00000617006 1229 ntBASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AL023875.1-201ENST00000640777 796 ntBASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 C18orf15-201ENST00000623680 2534 ntBASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.21□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms