Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFAP99D6REC4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CFAP99D6REC4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 AC211486.1-202ENST00000416371 468 ntBASIC16.28■□□□□ 0.2
CFAP99D6REC4 ADH5P3-201ENST00000433842 1137 ntBASIC16.28■□□□□ 0.2
CFAP99D6REC4 AC211476.1-201ENST00000503899 468 ntBASIC16.28■□□□□ 0.2
CFAP99D6REC4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 U82695.1-201ENST00000635752 1889 ntBASIC16.28■□□□□ 0.2
CFAP99D6REC4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFAP99D6REC4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CFAP99D6REC4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP99D6REC4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP99D6REC4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP99D6REC4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP99D6REC4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP99D6REC4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP99D6REC4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP99D6REC4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 AC105233.2-201ENST00000523697 349 ntBASIC16.27■□□□□ 0.2
CFAP99D6REC4 AF228730.5-201ENST00000530288 346 ntBASIC16.27■□□□□ 0.2
CFAP99D6REC4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 AC023511.2-201ENST00000618803 211 ntBASIC16.27■□□□□ 0.2
CFAP99D6REC4 AC008267.7-201ENST00000624570 1194 ntBASIC16.27■□□□□ 0.2
CFAP99D6REC4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.27■□□□□ 0.2
CFAP99D6REC4 AC073439.1-201ENST00000624121 1774 ntBASIC16.27■□□□□ 0.2
CFAP99D6REC4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CFAP99D6REC4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CFAP99D6REC4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CFAP99D6REC4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CFAP99D6REC4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CFAP99D6REC4 AC005622.1-201ENST00000636801 1703 ntBASIC16.27■□□□□ 0.19
CFAP99D6REC4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.27■□□□□ 0.19
CFAP99D6REC4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms