Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC23.72■■□□□ 1.39
HFM1A2PYH4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC23.72■■□□□ 1.39
HFM1A2PYH4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HFM1A2PYH4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC23.72■■□□□ 1.39
HFM1A2PYH4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC23.72■■□□□ 1.39
HFM1A2PYH4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
HFM1A2PYH4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC23.72■■□□□ 1.39
HFM1A2PYH4 TPRX2P-201ENST00000535362 881 ntBASIC23.72■■□□□ 1.39
HFM1A2PYH4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC23.72■■□□□ 1.39
HFM1A2PYH4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
HFM1A2PYH4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
HFM1A2PYH4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
HFM1A2PYH4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC23.72■■□□□ 1.39
HFM1A2PYH4 AC099398.1-201ENST00000567919 2776 ntBASIC23.72■■□□□ 1.39
HFM1A2PYH4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
HFM1A2PYH4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HFM1A2PYH4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
HFM1A2PYH4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HFM1A2PYH4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HFM1A2PYH4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 CD81-207ENST00000481687 890 ntTSL 2 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 TP53TG3HP-202ENST00000569755 579 ntBASIC23.71■■□□□ 1.39
HFM1A2PYH4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
HFM1A2PYH4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
HFM1A2PYH4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
HFM1A2PYH4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC23.71■■□□□ 1.39
HFM1A2PYH4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
HFM1A2PYH4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
HFM1A2PYH4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.39
HFM1A2PYH4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
HFM1A2PYH4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
HFM1A2PYH4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC23.7■■□□□ 1.38
HFM1A2PYH4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HFM1A2PYH4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
HFM1A2PYH4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC23.7■■□□□ 1.38
HFM1A2PYH4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HFM1A2PYH4 TOMM22P5-201ENST00000416399 439 ntBASIC23.7■■□□□ 1.38
HFM1A2PYH4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC23.7■■□□□ 1.38
HFM1A2PYH4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
HFM1A2PYH4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
HFM1A2PYH4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC23.7■■□□□ 1.38
HFM1A2PYH4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
HFM1A2PYH4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC23.7■■□□□ 1.38
HFM1A2PYH4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HFM1A2PYH4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC23.7■■□□□ 1.38
HFM1A2PYH4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC23.7■■□□□ 1.38
HFM1A2PYH4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HFM1A2PYH4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC23.7■■□□□ 1.38
HFM1A2PYH4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HFM1A2PYH4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HFM1A2PYH4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
HFM1A2PYH4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
HFM1A2PYH4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
HFM1A2PYH4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HFM1A2PYH4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC23.69■■□□□ 1.38
HFM1A2PYH4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC23.69■■□□□ 1.38
HFM1A2PYH4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC23.69■■□□□ 1.38
HFM1A2PYH4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC23.69■■□□□ 1.38
HFM1A2PYH4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC23.69■■□□□ 1.38
HFM1A2PYH4 AC007431.3-201ENST00000623221 587 ntBASIC23.69■■□□□ 1.38
HFM1A2PYH4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HFM1A2PYH4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
HFM1A2PYH4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC23.69■■□□□ 1.38
HFM1A2PYH4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HFM1A2PYH4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
HFM1A2PYH4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC23.69■■□□□ 1.38
HFM1A2PYH4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HFM1A2PYH4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
HFM1A2PYH4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
HFM1A2PYH4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HFM1A2PYH4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC23.69■■□□□ 1.38
HFM1A2PYH4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HFM1A2PYH4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HFM1A2PYH4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
HFM1A2PYH4 COX5BP8-201ENST00000416911 349 ntBASIC23.68■■□□□ 1.38
HFM1A2PYH4 AC098850.1-201ENST00000419919 790 ntBASIC23.68■■□□□ 1.38
HFM1A2PYH4 AL353779.1-201ENST00000434793 351 ntBASIC23.68■■□□□ 1.38
HFM1A2PYH4 USP40-206ENST00000443711 628 ntTSL 2 BASIC23.68■■□□□ 1.38
HFM1A2PYH4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HFM1A2PYH4 MEIS3P1-201ENST00000495167 958 ntBASIC23.68■■□□□ 1.38
HFM1A2PYH4 CHCHD2P3-201ENST00000603038 451 ntBASIC23.68■■□□□ 1.38
HFM1A2PYH4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
HFM1A2PYH4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC23.68■■□□□ 1.38
HFM1A2PYH4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC23.68■■□□□ 1.38
HFM1A2PYH4 AC007541.1-201ENST00000570282 1469 ntBASIC23.68■■□□□ 1.38
HFM1A2PYH4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HFM1A2PYH4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HFM1A2PYH4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC23.68■■□□□ 1.38
HFM1A2PYH4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC23.68■■□□□ 1.38
HFM1A2PYH4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
HFM1A2PYH4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms