Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 LINC02199-201ENST00000506655 2702 ntBASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 AP005117.1-202ENST00000581724 1908 ntBASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV5-4A0A0C4DH59 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 AC025678.2-201ENST00000562061 970 ntBASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 AC007950.2-201ENST00000615045 2347 ntBASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 KRT8P37-201ENST00000451609 1420 ntBASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRBV5-4A0A0C4DH59 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 CNN2P2-201ENST00000443536 909 ntBASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 CNN2P3-201ENST00000450201 906 ntBASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 AC051619.7-201ENST00000568314 623 ntBASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 AL136317.3-201ENST00000618497 906 ntBASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 KRT18P28-201ENST00000453838 1332 ntBASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRBV5-4A0A0C4DH59 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 REXO1L1P-202ENST00000608646 1974 ntBASIC15.89■□□□□ 0.13
TRBV5-4A0A0C4DH59 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms