Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 AC006449.6-201ENST00000612330 2296 ntBASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 AC025580.3-201ENST00000617932 1424 ntBASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 AC026396.1-201ENST00000419388 421 ntBASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 RNA5SP416-201ENST00000516838 111 ntBASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 CBFB-203ENST00000561924 584 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 AQP6-205ENST00000618286 829 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 LINC02199-201ENST00000506655 2702 ntBASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 AL391005.1-201ENST00000623953 2435 ntBASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
TRGV1A0A0A0MS02 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 MTHFR-217ENST00000641820 1569 ntBASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 MED15P5-201ENST00000423150 992 ntBASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 RHOQP3-201ENST00000437982 621 ntBASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 FDX1P1-201ENST00000449115 551 ntBASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 MIR3909-201ENST00000579518 119 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms