Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 TERF1P1-201ENST00000311003 1181 ntBASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 SPDYE13P-201ENST00000445314 798 ntBASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 MIR4492-201ENST00000581627 80 ntBASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 AC020765.3-201ENST00000613051 740 ntBASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 AL122018.1-201ENST00000446607 2310 ntBASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KCNIP3Q9Y2W7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 AC104581.4-201ENST00000623126 3052 ntBASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 MINOS1P3-201ENST00000457048 203 ntBASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 AC083849.1-201ENST00000615227 514 ntBASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KCNIP3Q9Y2W7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
KCNIP3Q9Y2W7 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms