Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 AC006538.1-201ENST00000567905 1585 ntBASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 TREML5P-201ENST00000421694 576 ntBASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 AC018529.1-201ENST00000613063 361 ntBASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 FO538757.1-201ENST00000623083 1397 ntBASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
CLIP2Q9UDT6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 GPAA1P2-202ENST00000606848 1787 ntBASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 AC140878.1-201ENST00000565277 250 ntBASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 AC003101.2-201ENST00000612557 442 ntBASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 LINC00554-201ENST00000564841 3011 ntBASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 AC007950.2-201ENST00000615045 2347 ntBASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLIP2Q9UDT6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 GGT4P-201ENST00000623672 1708 ntBASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 FAM8A3P-201ENST00000427218 844 ntBASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 BCRP1-201ENST00000444246 691 ntBASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 AC093214.1-201ENST00000511688 1107 ntBASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 AC092364.2-202ENST00000597012 1073 ntBASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 LINC02084-201ENST00000606069 1096 ntBASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 AL096865.1-201ENST00000606796 927 ntBASIC19.28■□□□□ 0.68
CLIP2Q9UDT6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms