Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 RPS9P1-201ENST00000419943 583 ntBASIC14.8□□□□□ -0.04
CHD8Q9HCK8 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 MIR6842-201ENST00000612539 65 ntBASIC14.8□□□□□ -0.04
CHD8Q9HCK8 AL805961.1-203ENST00000641078 1258 ntBASIC14.8□□□□□ -0.04
CHD8Q9HCK8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 AC007787.1-201ENST00000588095 1583 ntBASIC14.8□□□□□ -0.04
CHD8Q9HCK8 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHD8Q9HCK8 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.8□□□□□ -0.04
CHD8Q9HCK8 DNM1P51-201ENST00000558149 522 ntBASIC14.8□□□□□ -0.04
CHD8Q9HCK8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 AL008707.1-201ENST00000422498 534 ntBASIC14.79□□□□□ -0.04
CHD8Q9HCK8 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 AL353622.2-201ENST00000605846 425 ntBASIC14.79□□□□□ -0.04
CHD8Q9HCK8 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.79□□□□□ -0.04
CHD8Q9HCK8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 CNN2P10-201ENST00000443067 918 ntBASIC14.79□□□□□ -0.04
CHD8Q9HCK8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 ECM1P1-201ENST00000604092 1279 ntBASIC14.79□□□□□ -0.04
CHD8Q9HCK8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHD8Q9HCK8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.78□□□□□ -0.04
CHD8Q9HCK8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms