Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SND1-IT1Q9HBX3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 AC112504.1-201ENST00000623415 1841 ntBASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 CCS-201ENST00000310190 942 ntTSL 5 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 AC091607.1-201ENST00000490318 1060 ntBASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 AC097493.4-201ENST00000641197 219 ntBASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SND1-IT1Q9HBX3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SND1-IT1Q9HBX3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 GOLGA8DP-202ENST00000341390 2184 ntBASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC10.95□□□□□ -0.66
SND1-IT1Q9HBX3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms