Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 AC245100.5-201ENST00000452108 331 ntBASIC17.47■□□□□ 0.39
NXF3Q9H4D5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 AC005225.4-201ENST00000557330 545 ntBASIC17.47■□□□□ 0.39
NXF3Q9H4D5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.47■□□□□ 0.39
NXF3Q9H4D5 AL691432.1-201ENST00000596308 1422 ntBASIC17.47■□□□□ 0.39
NXF3Q9H4D5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 AC007541.1-201ENST00000570282 1469 ntBASIC17.46■□□□□ 0.39
NXF3Q9H4D5 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 SDHAP3-202ENST00000515467 728 ntBASIC17.46■□□□□ 0.39
NXF3Q9H4D5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 AC239800.4-201ENST00000603712 296 ntBASIC17.46■□□□□ 0.39
NXF3Q9H4D5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.46■□□□□ 0.39
NXF3Q9H4D5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 AC004461.2-201ENST00000629517 803 ntBASIC17.46■□□□□ 0.39
NXF3Q9H4D5 AC025048.6-201ENST00000634326 1161 ntBASIC17.46■□□□□ 0.39
NXF3Q9H4D5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NXF3Q9H4D5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.46■□□□□ 0.38
NXF3Q9H4D5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
NXF3Q9H4D5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
NXF3Q9H4D5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NXF3Q9H4D5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
NXF3Q9H4D5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 SPDYE19P-201ENST00000338590 713 ntBASIC17.45■□□□□ 0.38
NXF3Q9H4D5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 AC005034.1-201ENST00000426657 489 ntBASIC17.45■□□□□ 0.38
NXF3Q9H4D5 DOC2GP-202ENST00000514950 1163 ntBASIC17.45■□□□□ 0.38
NXF3Q9H4D5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 API5-211ENST00000534695 560 ntTSL 5 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.45■□□□□ 0.38
NXF3Q9H4D5 AL035252.4-201ENST00000624174 288 ntBASIC17.45■□□□□ 0.38
NXF3Q9H4D5 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms