Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 GPS2P2-201ENST00000430745 888 ntBASIC17.12■□□□□ 0.33
LHX5Q9H2C1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 ALG1L8P-201ENST00000533887 760 ntBASIC17.12■□□□□ 0.33
LHX5Q9H2C1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 AC106028.4-201ENST00000614509 607 ntBASIC17.12■□□□□ 0.33
LHX5Q9H2C1 AC009093.7-201ENST00000623853 1223 ntBASIC17.12■□□□□ 0.33
LHX5Q9H2C1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 AL691432.1-201ENST00000596308 1422 ntBASIC17.12■□□□□ 0.33
LHX5Q9H2C1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LHX5Q9H2C1 AC011477.6-201ENST00000604980 1927 ntBASIC17.11■□□□□ 0.33
LHX5Q9H2C1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 AC093028.1-201ENST00000622998 982 ntBASIC17.11■□□□□ 0.33
LHX5Q9H2C1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LHX5Q9H2C1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 AC004449.1-201ENST00000564240 433 ntBASIC17.1■□□□□ 0.33
LHX5Q9H2C1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LHX5Q9H2C1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX5Q9H2C1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms