Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 AC006557.2-201ENST00000592985 1240 ntBASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 AL732292.2-201ENST00000609649 430 ntBASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 GGTLC5P-201ENST00000617623 998 ntBASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
COMMD4Q9H0A8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 DBET-201ENST00000630918 3363 ntBASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 FOSL1P1-201ENST00000511041 816 ntBASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 AL355877.3-201ENST00000622820 899 ntBASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COMMD4Q9H0A8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 AC068418.2-201ENST00000577309 3703 ntBASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 AL592424.1-201ENST00000563624 1536 ntBASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 AC107918.2-201ENST00000530817 355 ntBASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 U82695.1-201ENST00000635752 1889 ntBASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.43□□□□□ -0.1
COMMD4Q9H0A8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms