Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 KRT126P-201ENST00000549467 1181 ntBASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 AC087641.1-201ENST00000557561 1021 ntBASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 AC020765.3-201ENST00000613051 740 ntBASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 AL691432.3-201ENST00000621860 400 ntBASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.64■□□□□ 0.09
THUMPD3Q9BV44 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 RPS2P1-201ENST00000434010 821 ntBASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 TP73-AS1-207ENST00000624167 988 ntBASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 AC073347.1-201ENST00000421633 2643 ntBASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
THUMPD3Q9BV44 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 AC079781.3-201ENST00000449110 356 ntBASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 OR7E14P-202ENST00000530490 1290 ntBASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 AC023824.1-201ENST00000562945 2975 ntBASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
THUMPD3Q9BV44 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms