Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
S1PR3Q99500 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.5□□□□□ -0.25
S1PR3Q99500 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.5□□□□□ -0.25
S1PR3Q99500 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.5□□□□□ -0.25
S1PR3Q99500 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 AC007950.2-201ENST00000615045 2347 ntBASIC13.5□□□□□ -0.25
S1PR3Q99500 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.5□□□□□ -0.25
S1PR3Q99500 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
S1PR3Q99500 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
S1PR3Q99500 AL365209.1-201ENST00000624418 6473 ntBASIC13.49□□□□□ -0.25
S1PR3Q99500 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 AL365203.3-201ENST00000609742 2057 ntBASIC13.49□□□□□ -0.25
S1PR3Q99500 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.49□□□□□ -0.25
S1PR3Q99500 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
S1PR3Q99500 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.49□□□□□ -0.25
S1PR3Q99500 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 RNU1-129P-201ENST00000384064 167 ntBASIC13.49□□□□□ -0.25
S1PR3Q99500 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.49□□□□□ -0.25
S1PR3Q99500 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.49□□□□□ -0.25
S1PR3Q99500 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.49□□□□□ -0.25
S1PR3Q99500 AC106730.1-201ENST00000566722 1090 ntBASIC13.49□□□□□ -0.25
S1PR3Q99500 U1.21-201ENST00000580816 167 ntBASIC13.49□□□□□ -0.25
S1PR3Q99500 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
S1PR3Q99500 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.49□□□□□ -0.25
S1PR3Q99500 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.49□□□□□ -0.25
S1PR3Q99500 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
S1PR3Q99500 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.49□□□□□ -0.25
S1PR3Q99500 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
S1PR3Q99500 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
S1PR3Q99500 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.48□□□□□ -0.25
S1PR3Q99500 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
S1PR3Q99500 PCDHA3-202ENST00000532566 4594 ntBASIC13.48□□□□□ -0.25
S1PR3Q99500 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
S1PR3Q99500 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 HMGA1P7-201ENST00000406908 502 ntBASIC13.48□□□□□ -0.25
S1PR3Q99500 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
S1PR3Q99500 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.48□□□□□ -0.25
S1PR3Q99500 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
S1PR3Q99500 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.48□□□□□ -0.25
S1PR3Q99500 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms