Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 AC004987.2-201ENST00000395959 1148 ntBASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 NKILA-202ENST00000614771 2598 ntBASIC16.84■□□□□ 0.29
CDK5RAP1Q96SZ6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.83■□□□□ 0.29
CDK5RAP1Q96SZ6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 FAM207CP-201ENST00000443486 507 ntBASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 AC004890.2-204ENST00000481968 304 ntBASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.83■□□□□ 0.28
CDK5RAP1Q96SZ6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 TSSK5P-201ENST00000423978 907 ntBASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 RN7SL618P-201ENST00000477850 296 ntBASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 ZNF890P-202ENST00000530367 1156 ntBASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 MIR6069-201ENST00000620069 79 ntBASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CDK5RAP1Q96SZ6 AC092171.3-201ENST00000610122 2651 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms