Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 SPDYE18-201ENST00000510091 1050 ntBASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 AC024267.1-201ENST00000582320 895 ntBASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 SRD5A3P1-201ENST00000603021 949 ntBASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 AL033527.5-202ENST00000641632 1098 ntBASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 NKILA-202ENST00000614771 2598 ntBASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC46A1Q96NT5 HLA-A-202ENST00000376806 1854 ntBASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 KRT8P12-202ENST00000472924 1397 ntBASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 RN7SL837P-201ENST00000463010 287 ntBASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 SDHAP3-202ENST00000515467 728 ntBASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 AGGF1P2-201ENST00000426656 2106 ntBASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SLC46A1Q96NT5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 TTTY23B-201ENST00000442790 549 ntBASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 MYCLP2-201ENST00000449268 967 ntBASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 TPRX2P-201ENST00000535362 881 ntBASIC15.49■□□□□ 0.07
SLC46A1Q96NT5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms