Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 AC008677.1-201ENST00000519230 1561 ntBASIC12.74□□□□□ -0.37
RAX2Q96IS3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 KRT8P39-201ENST00000396270 1433 ntBASIC12.74□□□□□ -0.37
RAX2Q96IS3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 SPDYE7P-202ENST00000420373 878 ntBASIC12.74□□□□□ -0.37
RAX2Q96IS3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 AC125807.1-201ENST00000483097 614 ntBASIC12.74□□□□□ -0.37
RAX2Q96IS3 AC105233.2-201ENST00000523697 349 ntBASIC12.74□□□□□ -0.37
RAX2Q96IS3 AP002490.2-201ENST00000524791 560 ntBASIC12.74□□□□□ -0.37
RAX2Q96IS3 AF228730.5-201ENST00000530288 346 ntBASIC12.74□□□□□ -0.37
RAX2Q96IS3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 AL391256.1-201ENST00000443260 1855 ntBASIC12.74□□□□□ -0.37
RAX2Q96IS3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAX2Q96IS3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.74□□□□□ -0.37
RAX2Q96IS3 SNX33P1-201ENST00000592116 1762 ntBASIC12.74□□□□□ -0.37
RAX2Q96IS3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 TSPY26P-202ENST00000565928 3884 ntBASIC12.73□□□□□ -0.37
RAX2Q96IS3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAX2Q96IS3 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 AC107890.1-201ENST00000422478 521 ntBASIC12.73□□□□□ -0.37
RAX2Q96IS3 FAM8A3P-201ENST00000427218 844 ntBASIC12.73□□□□□ -0.37
RAX2Q96IS3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 PRYP6-201ENST00000514804 343 ntBASIC12.73□□□□□ -0.37
RAX2Q96IS3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 SPCS2P1-201ENST00000561636 679 ntBASIC12.73□□□□□ -0.37
RAX2Q96IS3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.73□□□□□ -0.37
RAX2Q96IS3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms