Protein–RNA interactions for Protein: Q96ES7

SGF29, SAGA-associated factor 29, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGF29Q96ES7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.52■□□□□ 0.24
SGF29Q96ES7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 MIR770-201ENST00000390219 98 ntBASIC16.52■□□□□ 0.24
SGF29Q96ES7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGF29Q96ES7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.52■□□□□ 0.24
SGF29Q96ES7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SGF29Q96ES7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGF29Q96ES7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SGF29Q96ES7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SGF29Q96ES7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGF29Q96ES7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGF29Q96ES7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGF29Q96ES7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SGF29Q96ES7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SGF29Q96ES7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.52■□□□□ 0.23
SGF29Q96ES7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGF29Q96ES7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGF29Q96ES7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGF29Q96ES7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGF29Q96ES7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGF29Q96ES7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SGF29Q96ES7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGF29Q96ES7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 AC106028.4-201ENST00000614509 607 ntBASIC16.51■□□□□ 0.23
SGF29Q96ES7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 KRT8P39-201ENST00000396270 1433 ntBASIC16.51■□□□□ 0.23
SGF29Q96ES7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SGF29Q96ES7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SGF29Q96ES7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 AL512652.2-201ENST00000625156 1716 ntBASIC16.5■□□□□ 0.23
SGF29Q96ES7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 GGT3P-204ENST00000453783 1664 ntBASIC16.5■□□□□ 0.23
SGF29Q96ES7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGF29Q96ES7 RNU1-129P-201ENST00000384064 167 ntBASIC16.5■□□□□ 0.23
SGF29Q96ES7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.5■□□□□ 0.23
SGF29Q96ES7 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms