Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 AL353779.1-201ENST00000434793 351 ntBASIC17.58■□□□□ 0.4
PGBD4Q96DM1 GAPDHP21-201ENST00000450301 1010 ntBASIC17.58■□□□□ 0.4
PGBD4Q96DM1 POU5F1P6-201ENST00000466990 990 ntBASIC17.58■□□□□ 0.4
PGBD4Q96DM1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PGBD4Q96DM1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 SDHAP3-202ENST00000515467 728 ntBASIC17.57■□□□□ 0.4
PGBD4Q96DM1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.57■□□□□ 0.4
PGBD4Q96DM1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 HLA-A-202ENST00000376806 1854 ntBASIC17.56■□□□□ 0.4
PGBD4Q96DM1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 CR383656.12-201ENST00000549567 513 ntBASIC17.56■□□□□ 0.4
PGBD4Q96DM1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 AL132655.2-201ENST00000596276 594 ntBASIC17.56■□□□□ 0.4
PGBD4Q96DM1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PGBD4Q96DM1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms