Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
FOXRED1Q96CU9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 SLC22A20-204ENST00000530038 1673 ntBASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 AC129492.6-201ENST00000611383 1305 ntBASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 PTCHD3P3-201ENST00000403073 906 ntBASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 MTDHP3-201ENST00000594186 672 ntBASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FOXRED1Q96CU9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 AC073648.2-201ENST00000510116 352 ntBASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 AL662844.1-201ENST00000546340 181 ntBASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 GGTLC5P-201ENST00000617623 998 ntBASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
FOXRED1Q96CU9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms