Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP13Q92995 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
USP13Q92995 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP13Q92995 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP13Q92995 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP13Q92995 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP13Q92995 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.05■□□□□ 0.32
USP13Q92995 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP13Q92995 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP13Q92995 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP13Q92995 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP13Q92995 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
USP13Q92995 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP13Q92995 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP13Q92995 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.05■□□□□ 0.32
USP13Q92995 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.04■□□□□ 0.32
USP13Q92995 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.04■□□□□ 0.32
USP13Q92995 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.04■□□□□ 0.32
USP13Q92995 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.04■□□□□ 0.32
USP13Q92995 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
USP13Q92995 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
USP13Q92995 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.04■□□□□ 0.32
USP13Q92995 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.04■□□□□ 0.32
USP13Q92995 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.04■□□□□ 0.32
USP13Q92995 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.04■□□□□ 0.32
USP13Q92995 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.04■□□□□ 0.32
USP13Q92995 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.04■□□□□ 0.32
USP13Q92995 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.04■□□□□ 0.32
USP13Q92995 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
USP13Q92995 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
USP13Q92995 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 DOC2GP-204ENST00000639052 2548 ntBASIC17.04■□□□□ 0.32
USP13Q92995 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
USP13Q92995 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.04■□□□□ 0.32
USP13Q92995 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
USP13Q92995 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP13Q92995 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
USP13Q92995 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
USP13Q92995 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.03■□□□□ 0.32
USP13Q92995 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.03■□□□□ 0.32
USP13Q92995 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
USP13Q92995 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
USP13Q92995 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.03■□□□□ 0.32
USP13Q92995 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 RPL37AP1-201ENST00000412502 279 ntBASIC17.03■□□□□ 0.32
USP13Q92995 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.03■□□□□ 0.32
USP13Q92995 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.03■□□□□ 0.32
USP13Q92995 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
USP13Q92995 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.03■□□□□ 0.32
USP13Q92995 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.03■□□□□ 0.32
USP13Q92995 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.03■□□□□ 0.32
USP13Q92995 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP13Q92995 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.03■□□□□ 0.32
USP13Q92995 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.03■□□□□ 0.32
USP13Q92995 AC105021.1-202ENST00000570572 669 ntBASIC17.03■□□□□ 0.32
USP13Q92995 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.03■□□□□ 0.32
USP13Q92995 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.03■□□□□ 0.32
USP13Q92995 AL589739.1-201ENST00000607720 493 ntBASIC17.03■□□□□ 0.32
USP13Q92995 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.03■□□□□ 0.32
USP13Q92995 TEX28P1-201ENST00000613479 1221 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms