Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S1Q92572 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
AP3S1Q92572 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
AP3S1Q92572 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
AP3S1Q92572 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
AP3S1Q92572 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S1Q92572 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S1Q92572 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
AP3S1Q92572 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.11
AP3S1Q92572 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AP3S1Q92572 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AP3S1Q92572 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AP3S1Q92572 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
AP3S1Q92572 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 CYP2D8P-201ENST00000433633 1490 ntBASIC14.39□□□□□ -0.11
AP3S1Q92572 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.39□□□□□ -0.11
AP3S1Q92572 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.39□□□□□ -0.11
AP3S1Q92572 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 AC009533.2-201ENST00000543664 586 ntBASIC14.39□□□□□ -0.11
AP3S1Q92572 AC142381.4-202ENST00000563973 229 ntBASIC14.39□□□□□ -0.11
AP3S1Q92572 AC020765.3-201ENST00000613051 740 ntBASIC14.39□□□□□ -0.11
AP3S1Q92572 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
AP3S1Q92572 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.39□□□□□ -0.11
AP3S1Q92572 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.39□□□□□ -0.11
AP3S1Q92572 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AP3S1Q92572 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.39□□□□□ -0.11
AP3S1Q92572 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S1Q92572 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S1Q92572 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP3S1Q92572 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S1Q92572 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.38□□□□□ -0.11
AP3S1Q92572 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S1Q92572 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
AP3S1Q92572 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S1Q92572 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP3S1Q92572 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
AP3S1Q92572 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S1Q92572 AL592424.1-201ENST00000563624 1536 ntBASIC14.38□□□□□ -0.11
AP3S1Q92572 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
AP3S1Q92572 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.38□□□□□ -0.11
AP3S1Q92572 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S1Q92572 AL020989.1-201ENST00000422979 469 ntBASIC14.38□□□□□ -0.11
AP3S1Q92572 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.38□□□□□ -0.11
AP3S1Q92572 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.38□□□□□ -0.11
AP3S1Q92572 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.38□□□□□ -0.11
AP3S1Q92572 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.38□□□□□ -0.11
AP3S1Q92572 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S1Q92572 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.38□□□□□ -0.11
AP3S1Q92572 AC005336.2-201ENST00000593183 939 ntBASIC14.38□□□□□ -0.11
AP3S1Q92572 AL353801.3-201ENST00000609898 542 ntBASIC14.38□□□□□ -0.11
AP3S1Q92572 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms