Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SHC3Q92529 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.32■□□□□ 0.36
SHC3Q92529 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC3Q92529 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.32■□□□□ 0.36
SHC3Q92529 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.32■□□□□ 0.36
SHC3Q92529 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SHC3Q92529 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SHC3Q92529 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHC3Q92529 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.32■□□□□ 0.36
SHC3Q92529 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.32■□□□□ 0.36
SHC3Q92529 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHC3Q92529 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.32■□□□□ 0.36
SHC3Q92529 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SHC3Q92529 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.32■□□□□ 0.36
SHC3Q92529 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SHC3Q92529 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SHC3Q92529 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SHC3Q92529 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.32■□□□□ 0.36
SHC3Q92529 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
SHC3Q92529 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
SHC3Q92529 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC3Q92529 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC3Q92529 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.31■□□□□ 0.36
SHC3Q92529 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
SHC3Q92529 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 AL592309.1-201ENST00000443127 649 ntBASIC17.31■□□□□ 0.36
SHC3Q92529 CEND1P1-201ENST00000451006 455 ntBASIC17.31■□□□□ 0.36
SHC3Q92529 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.31■□□□□ 0.36
SHC3Q92529 IGHV3-62-201ENST00000520057 340 ntBASIC17.31■□□□□ 0.36
SHC3Q92529 AC022145.2-201ENST00000598203 171 ntBASIC17.31■□□□□ 0.36
SHC3Q92529 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.31■□□□□ 0.36
SHC3Q92529 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.31■□□□□ 0.36
SHC3Q92529 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SHC3Q92529 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 AL513210.1-201ENST00000629608 234 ntBASIC17.31■□□□□ 0.36
SHC3Q92529 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.31■□□□□ 0.36
SHC3Q92529 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.31■□□□□ 0.36
SHC3Q92529 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.31■□□□□ 0.36
SHC3Q92529 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHC3Q92529 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC3Q92529 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC3Q92529 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 AC134407.2-201ENST00000625089 1978 ntBASIC17.3■□□□□ 0.36
SHC3Q92529 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC3Q92529 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 HLA-H-201ENST00000383620 1096 ntBASIC17.3■□□□□ 0.36
SHC3Q92529 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SHC3Q92529 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 SLC25A39P2-201ENST00000537614 270 ntBASIC17.3■□□□□ 0.36
SHC3Q92529 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 MIR4469-201ENST00000583919 79 ntBASIC17.3■□□□□ 0.36
SHC3Q92529 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SHC3Q92529 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC3Q92529 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.3■□□□□ 0.36
SHC3Q92529 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHC3Q92529 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SHC3Q92529 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms