Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 AC148477.5-201ENST00000625164 1645 ntBASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 NCF1C-201ENST00000438382 1427 ntBASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB40AQ8WXH6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 AL671710.1-201ENST00000610245 2349 ntBASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 MIR574-201ENST00000385209 96 ntBASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 AC145285.3-201ENST00000564603 959 ntBASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 AL356488.2-201ENST00000602755 427 ntBASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 AL136379.1-201ENST00000623471 2642 ntBASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 AP002414.3-201ENST00000589352 1468 ntBASIC14.38□□□□□ -0.11
RAB40AQ8WXH6 FAM45BP-202ENST00000592932 1624 ntBASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 KRT18P58-201ENST00000527480 1120 ntBASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 AC004706.3-202ENST00000621574 984 ntBASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 AC005593.1-201ENST00000624894 515 ntBASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB40AQ8WXH6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms