Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AP002414.2-201ENST00000591780 3365 ntBASIC14.16□□□□□ -0.14
CCDC107Q8WV48 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC107Q8WV48 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 AC023157.3-201ENST00000619086 2088 ntBASIC14.15□□□□□ -0.14
CCDC107Q8WV48 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 AP002414.1-201ENST00000391405 1147 ntBASIC14.15□□□□□ -0.14
CCDC107Q8WV48 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 PRYP5-201ENST00000451909 266 ntBASIC14.15□□□□□ -0.14
CCDC107Q8WV48 KRT18P31-201ENST00000506277 1292 ntBASIC14.15□□□□□ -0.14
CCDC107Q8WV48 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 PRELID1P1-202ENST00000567272 903 ntBASIC14.15□□□□□ -0.14
CCDC107Q8WV48 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 AL139011.1-202ENST00000642063 584 ntBASIC14.15□□□□□ -0.14
CCDC107Q8WV48 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC107Q8WV48 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.15□□□□□ -0.15
CCDC107Q8WV48 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.14□□□□□ -0.15
CCDC107Q8WV48 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms