Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 AC093520.2-201ENST00000561830 333 ntBASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 AP001160.2-201ENST00000596071 487 ntBASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC12Q8WUD4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 FOXO1B-201ENST00000504678 1527 ntBASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 FAM220BP-201ENST00000377689 816 ntBASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 AC006449.5-201ENST00000610658 2098 ntBASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC12Q8WUD4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 AC006449.6-201ENST00000612330 2296 ntBASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 MTHFR-217ENST00000641820 1569 ntBASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC12Q8WUD4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC12Q8WUD4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC12Q8WUD4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC12Q8WUD4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC12Q8WUD4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC12Q8WUD4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC12Q8WUD4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC12Q8WUD4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms