Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 AL031284.1-201ENST00000419297 478 ntBASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 AL773604.1-201ENST00000617417 272 ntBASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN22Q8N7P3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 AC008677.1-201ENST00000519230 1561 ntBASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 AC092919.2-201ENST00000623631 1645 ntBASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 MRPL20P1-201ENST00000400819 433 ntBASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 RNA5SP419-201ENST00000515908 135 ntBASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN22Q8N7P3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 RPS2P28-201ENST00000314255 741 ntBASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 AC098831.1-202ENST00000438821 336 ntBASIC14.85□□□□□ -0.03
CLDN22Q8N7P3 FAAHP1-202ENST00000446499 1238 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms